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X-ray scanning reveals secrets of fossil formation without disturbing natural decay process

A new study in Palaeontology has confirmed that X-ray computed tomography (XCT scanning) can be used to monitor decomposing organisms without altering the natural decay process鈥攁 vital step in understanding how fossils form.
A research team from the University of Birmingham entombed dead zebrafish within sediment to test whether repeatedly zapping decaying specimens with X-rays would change how they decompose.
Their findings suggest this noninvasive imaging technique allows scientists to watch decay happen in real time without disturbing the process鈥攗nlike traditional methods that require digging up and potentially damaging specimens.
"It's like getting a snapshot of nature's natural recycling program," said Dr. Iacopo Cavicchini, lead author on the study. "Previous methods were like trying to observe a smelly bag of goop by digging it up鈥攊t's very difficult and you inevitably alter what you're trying to study."
The research addresses a significant challenge in taphonomy鈥攖he study of how organisms decay and become fossils. Traditional decay experiments require researchers to unearth specimens to observe them, causing artificial damage or disarticulation that can mess with the results.
In order to test if CT scanning could be used in their experiments, the research team wanted to know whether X-ray exposure would interfere with the bacteria that drive decay.

Their findings showed that the microbes continued to decay the carcass, unimpeded by periodic exposure to X-rays鈥攑roving the technique serves as a crucial stepping stone toward more sophisticated noninvasive decay experiments that better mimic natural conditions of fossil formation.
"This study validates an important nondestructive tool for paleontologists and forensic scientists alike," said Dr. Thomas Clements, who supervised the project, now based at Friedrich-Alexander-Universit盲t Erlangen-N眉rnberg.
"We can now watch decay within sediments, providing unprecedented insights into the processes that ultimately create fossils."
Perhaps the most explosive finding in this study was the ability to witness鈥攊n high definition鈥攖he dramatic buildup of decomposition gases inside the fish carcasses before they eventually pop.
"We essentially created decaying fish fart surveillance," said Dr. Cavicchini, "which sounds silly until you realize it's providing crucial insights into how internal cavities collapse during fossilization."
More information: Iacopo Cavicchini et al, Investigating the impact of x鈥恟ays on decay: x鈥恟ay computed tomography as a non鈥恑nvasive visualization technique for sediment鈥恇ased decay experiments, Palaeontology (2025).
Journal information: Palaeontology
Provided by University of Birmingham